Teak genetic diversity in Ghana shows a narrow base for further breeding and a need for improved international collaboration for provenance exchange.
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Abstract
We evaluated the genetic diversity of teak provenances at a newly established provenance trial with 52 provenances collected from Africa, South America and Asia in Tain II Forest Reserve in Central Ghana. This provenance collection / trial was established to widen the genetic basis for Teak establishment in West Africa. Using Genotyping by Sequencing (GBS) we analysed the genetic diversity of these provenances. Results of the study revealed that, although acquired from a wide geographical range, most Teak provenances in the trial belong to only two distinct groups that are closely related. The implication of this finding is that, for breeding, a wider range of provenances are needed from the original Teak distribution areas and more specifically from Southern India. We conclude that urgent protection of older existing sources of genetic variation in Teak as well as an improvement of international collaboration under the Nagoya protocol with countries with native teak populations is necessary.
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Adu-Bredu, S et al. (2019). “Trait variations in 28-year-old teak (Tectona grandis) provenance field trials in Ghana”. West Africa. Southern Forests: a Journal of Forest Science 81(1), pp. 57–68. DOI: https://doi.org/10.2989/20702620.2018.1490993.
Bhat, K M and O M Hwan (2004). “Teak growers unite”. ITTO Tropical Forest Update, pp. 3–5. URL: https://www.itto.int/direct/topics/topics_pdf_download/topics_id=6670000&no=1&disp=inline.
Catchen, J et al. (2013). “Stacks: an analysis tool set for population genomics”. Molecular ecology 22(11), pp. 3124–3140. DOI: https://doi.org/10.1111/mec.12354.
CBD (2011). Nagoya Protocol on Access to Genetic Resources and the Fair and Equitable Sharing of Benefits Arising from their Utilisation to the convention on Biological Diversity. Montreal, Canada. URL: https://www.cbd.int/abs/doc/protocol/nagoya-protocol-en.pdf.
Chaix, G et al. (2011). “Genetic variation in major phenotypic traits among diverse genetic origins of teak (Tectona grandis L.f.) planted in Taliwas”. Annals of Forest Science 68, pp. 1015–1026. DOI: https://doi.org/10.1007/s13595-011-0109-8.
Danecek, P et al. (2011). “The variant call format and VCF tools”. Bioinformatics 27(15), pp. 2156–2158. DOI: https://dx.doi.org/10.1093/bioinformatics/btr330.
Dupuy, B and D Verhaegen (1993). “Le Teck de plantation Tectona grandis en Côte d’Ivoire”. Bois et Forêts des Tropiques 235, pp. 9–24. URL: http://bft.cirad.fr/cd/BFT_235_9-24.pdf.
Elshire, R J et al. (2011). “A robust, simple genotyping-by-sequencing (GBS) approach for high diversity species”. PloS one 6(5). DOI: https://doi.org/10.1371/journal.pone.0019379.
Evanno, G, S Regnaut, and J Goudet (2005). “Detecting the number of clusters of individuals using the software structure: a simulation study”. Molecular Ecology 14, pp. 2611–2620. DOI: https://doi.org/10.1111/j.1365-294X.2005.02553.x.
FAO (2014). Genebank Standards for Plant Genetic Resources for Food and Agriculture. Rome, Italy: Food and Agriculture Organization of the United Nations. URL: http://www.fao.org/3/i3704e/i3704e.pdf.
Fofana, I J et al. (2008). “Genetic structure and conservation of teak (Tectona grandis) plantations in Côte d’Ivoire, revealed by site specific recombinase (SSR)”. Tropical Conservation Science 1(3), pp. 279–292. DOI: https://doi.org/10.1177/194008290800100308.
FSD-FC Ghana (2017). National Forest Plantation Development Programme 2016 Annual report. Accra, Ghana. URL: https://www.oldwebsite.fcghana.org/userfiles/files/Plantation%20Annual%20Report/FC%20AnnualReport%202016.pdf.
Goh, D K S and O Monteuuis (2009). “Status of the “YSG Biotech” program of building teak genetic resources in Sabah”. Bois et Forêts des Tropiques 301, pp. 33–49. URL: https://agritrop.cirad.fr/552335/1/Goh&MonteuuisBFT2009.pdf.
Goh, D K S and O Monteuuis (2012). “Behaviour of the “YSG Biotech TG1-8” teak clones under various site conditions: first observations”. Bois et Forêts des Tropiques 311, pp. 5–19. URL: https://agritrop.cirad.fr/564461/1/564461.pdf.
Government Of India (2002). Export and Import Policy and Handbook of Procedures 2002-07 F.No.305/25/2002-FTT. New Dehli, India. URL: https://taxguru.in/custom-duty/exim-policy-200207-handbook-procedures-20022007-amendments-notifications-relating-eouepzethpstpsez-schemes-reg.html.
Graudal, L O V, E D Kjær, et al. (1999). Conservation of Genetic Resources of Teak (Tectona grandis) in Thailand. Copenhagen. URL: https://pdfs.semanticscholar.org/2ae1/57f7d1b76e563786ddb6a4e57779677f5e6e.pdf?_ga=2.
Graudal, L O V and S Moestrup (2017). “The Genetic Variation in Natural and Planted Teak Forests: Characterisation, Use and Conservation for the Future”. IUFRO World Series 36, pp. 19–29. URL: https://www.iufro.org/uploads/media/ws36.pdf.
Hansen, O K, S Changtragoon, B Ponoy, E D Kjær, et al. (2015). “Genetic resources of teak (Tectona grandis Linn. f.)-strong genetic structure among natural populations”. Tree Genetics & Genomes 11(802). DOI: https://doi.org/10.1007/s11295-014-0802-5.
Hansen, O K, S Changtragoon, B Ponoy, J Lopez, et al. (2017). “Worldwide translocation of teak: origin of landraces and present genetic base”. Tree Genetics & Genomes 13. DOI: https://doi.org/10.1007/s11295-017-1170-8.
Hodge, G R et al. (2019). 2019 Camcore Annual Report: International Tree Breeding and Gene Conservation. Raleigh, North Carolina: Camcore/North Carolina State University. URL: https://camcore.cnr.ncsu.edu/files/2020/04/AnnReport-2019.pdf.
ITTO (2020). ITTO Tropical Timber Market (TTM) Report. Volume 24 Number 7. Japan. URL: https://www.itto.int/files/user/mis/MIS_1-15_Apr2020.pdf.
Jerez, M and S Coutinho (2017). “Establishment and Management of Planted Teak Forests”. In: The Global Teak Study. Analysis, Evaluation and Future Potential of Teak Resources. Ed. by W Kollert and M Kleine. Vol. 36. Vienna: IUFRO, pp. 49–65. URL: https://www.iufro.org/uploads/media/ws36.pdf.
Jombart, T and I Ahmed (2011). “Adegenet 1.3-1: new tools for the analysis of genome-wide SNP data”. Bioinformatics, pp. 3070–3071. DOI: https://doi.org/10.1093/bioinformatics/btr521.
Kadio, A A (2006). Développement du clonage du teck et creation de plantations industrielles PD 22/98 Rev 1 (F) Rapport d’Achèvement. Abidjan. URL: https://www.itto.int/files/itto_project_db_input/2148/Competition/pd%2022-98-1%20rev1(F)%20f_Rapport%20d%C3%A2%C2%80%C2%99Achevement%20D%C3%83%C2%A9veloppement%20du%20clonage%20du%20teck%20et_f.pdf.
Kaosa-Ard, A, V Suangtho, and E D Kjær (1998). Experience from Tree Improvement of Teak (Tectona Grandis) in Thailand. Vol. 50. Technical Note. Humlebæk, Denmark: Danida Forest Seed Centre. URL: https://curis.ku.dk/ws/files/37387879/TN_50_ny.pdf.
Keiding, H, H Wellendorf, and E B Lauridsen (1986). Evaluation of an International Series of Teak Provenance Trials. Research and Documentation. Copenhagen, Denmark. URL: https://static-curis.ku.dk/portal/files/35116262/Teak_evaluation_1.pdf.
Kjær, E D, S Kajornsrichon, and E B Lauridsen (1999). “Heartwood, Calcium and Silica Content in Five Provenances of Teak (Tectona grandis L.)” Silvicultural Research Report 48, pp. 1–3. URL: https://www.thuenen.de/media/institute/fg/PDF/Silvae_Genetica/1999/Vol._48_Heft_1/48_1_1.pdf.
Kjær, E D, E B Lauridsen, and H Wellendorf (1995). Second Evaluation of an International Series of Teak Provenance Trials. Research and Documentation. Copenhagen. URL: https://static-curis.ku.dk/portal/files/20713023/teakii.pdf.
Kjær, E D, H R Siegismund, and V Suangtho (1996). “A Multivariate Study on Genetic Variation in Teak (Tectona grandis (L.))” Silvae Genetica 45(5-6), pp. 361–368. URL: https://www.thuenen.de/media/institute/fg/PDF/Silvae_Genetica/1996/Vol._45_Heft_5-6/45_5-6_361.pdf.
Kokou, K (2010). Développement du clonage du teck et création de plantations industrielles PD 22/98 Rev.1 (F) Rapport d’Evaluation à Posteriori. URL: https://www.itto.int/files/itto_project_db_input/2148/Ex-post/44RFM-4a-PD022-98R1F-Ex-post%20Full%20Report-Cote%20dIvoire.pdf.
Koskela, J et al. (2014). “Utilization and transfer of forest genetic resources: A global review”. Forest Ecology and Management, pp. 22–34. DOI: https://doi.org/10.1016/j.foreco.2014.07.017.
Li, Y L and J X Liu (2018). “StructureSelector: A web-based software to select and visualize the optimal number of clusters using multiple methods”. Molecular Ecology Resources. DOI: https://doi.org/10.1111/1755-0998.12719.
Madoffe, S S and J A Maghembe (1988). “Performance of Teak (Tectona grandis L.f.) provenances seventeen years after planting at Longuza, Tanzania”. Silvae Genetica 37, pp. 5–6. URL: https://www.thuenen.de/media/institute/fg/PDF/Silvae_Genetica/1988/Vol._37_Heft_5-6/37_5-6_175.pdf.
Mahesh, S et al. (2016). “Characterization and validation of teak plus trees ramets of national teak germplasm bank through microsatellites”. Tropical Plant Research 3(1), pp. 213–220. URL: https://www.tropicalplantresearch.com/archives/2016/vol3issue1/28.pdf.
Monteuuis, O and D K S Goh (2015). “Field growth performances of teak genotypes of different ages clonally produced by rooted cuttings, in vitro microcuttings, and meristem culture”. Canadian Journal of Forest Research 45, pp. 9–14. DOI: https://doi.org/10.1139/cjfr-2014-0339.
Nair, K S (2007). “Scale, markets and economics: Small-scale enterprises in a globalizing environment”. Unasylva 58(228), pp. 3–10. URL: http://www.fao.org/3/a1346e/a1346e02.pdf.
NCCPG (2007). Action plan for conservation of plants in cultivation. UK. URL: https://www.rhs.org.uk/science/pdf/conservation-and-biodiversity/conserving-garden-plants/actionplanconservationofplants.pdf.
Orwa, C et al. (2009). Agroforestree Database: a tree reference and selection guide version 4.0. URL: https://www.worldagroforestry.org/publication/agroforestree-database-tree-reference-and-selection-guide-version-40.
Paris, J R, J R Stevens, and J M Catchen (2017). “Lost in parameter space: a road map for stack”. Methods in Ecology and Evolution, pp. 1360–1373. DOI: https://doi.org/10.1111/2041-210X.12775.
Pedersen, A P et al. (2007). “Growth, Stem Quality and age-age Correlations in a Teak Provenance Trial in Tanzania”. Silvae Genetica 56, pp. 142–148. DOI: https://doi.org/10.1515/sg-2007-0022.
Pritchard, J K, M Stephens, and P Donnelly (2000). “Inference of population structure using multilocus genotype data”. Genetics 155(2), pp. 945–959. DOI: https://doi.org/10.1093/genetics/155.2.945.
R Core Team (2019). R: A language and environment for statistical computing. URL: https://www.r-project.org/.
Raomae, R (2012). State of Forest Genetic Resources in the Solomon Islands. Solomon Islands. URL: http://www.fao.org/3/i3825e/i3825e60.pdf.
Ugalde-Arias, L A (2013). TEAK: new trends in silviculture, commerzialisation and wood utilisation. Carthago, Costa Rica: International Forestry and Agroforestry.
Vaishnav, V and S A Ansari (2018). “Genetic Differentiation and Adaptability of Teak (Tectona grandis L.f.) Meta-Population in India”. Plant Molecular Biology Reporter 36(3), pp. 564–575. DOI: https://doi.org/10.1007/s11105-018-1101-3.
Verhaegen, D et al. (2010). “What is the genetic origin of teak (Tectona grandis L.) introduced in Africa and in Indonesia?” Tree genetics & genomes 6(5), pp. 717–733. DOI: https://doi.org/10.1007/s11295-010-0286-x.
Wanders, T H V (2014). “Potential seed stands in Ghana. Report on a visit to Forestry Commission Seed Stands ”. (internal report). Hattem, the Netherlands: Form International.
Wanders, T H V (2020). “Teak provenance trial monitoring 2020”. (internal report). Hattem, the Netherlands: Form International.
White, K J (1991). “Teak: Some aspects of research and development”. Bangkok: RAPA publication.